Transcript: ENST00000485751.1 KRT23-004

Description

keratin 23 (histone deacetylase inducible) [Source:HGNC Symbol;Acc:6438]

Gene Synonyms

CK23, DKFZP434G032, HAIK1, K23, MGC26158

Location

Chromosome 17: 39,092,700-39,093,738 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 540 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000108244.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000209718.3	KRT23-001	1987	422aa	ENSP00000209718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11380	I3L3Q6 K7EPI0 Q9C075	NM_015515.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436344.3	KRT23-005	1485	285aa	ENSP00000414056.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62182	I3L3Q6	NM_001282433.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485751.1	KRT23-004	865	52aa	ENSP00000467393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPI0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584517.1	KRT23-010	687	149aa	ENSP00000464051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR55	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000462312.1	KRT23-002	1462	37aa	ENSP00000462335.1	Nonsense mediated decay		Q9UFN7	-	-
ENST00000494691.1	KRT23-003	700	37aa	ENSP00000464548.1	Nonsense mediated decay		Q9UFN7	-	-
ENST00000582283.1	KRT23-008	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585006.1	KRT23-009	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582754.1	KRT23-006	1567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 865 bps, Translation length: 52 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000485751.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000257226 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000485751.1 KRT23-004

Summary