Transcript: ENST00000340258.5 RASSF4-001

Description

Ras association (RalGDS/AF-6) domain family member 4 [Source:HGNC Symbol;Acc:20793]

Gene Synonyms

AD037, MGC44914

Location

Chromosome 10: 45,455,240-45,491,339 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 15825 variant alleles and maps to 587 oligo probes.

Gene

This transcript is a product of gene ENSG00000107551.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340258.5	RASSF4-001	3641	321aa	ENSP00000339692.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7208	Q9H2L5	NM_032023.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334940.6	RASSF4-201	2518	330aa	ENSP00000334543.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLC1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374417.2	RASSF4-202	2399	126aa	ENSP00000363538.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2L5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427758.1	RASSF4-008	528	151aa	ENSP00000409767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T739	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484477.2	RASSF4-010	491	84aa	ENSP00000476848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428466.1	RASSF4-006	435	123aa	ENSP00000413468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T737	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483709.2	RASSF4-005	734	49aa	ENSP00000473555.1	Nonsense mediated decay		R4GNA4	-	-
ENST00000472561.1	RASSF4-012	892	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471808.1	RASSF4-009	410	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462822.1	RASSF4-007	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489171.1	RASSF4-002	4350	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471941.1	RASSF4-004	2275	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465735.1	RASSF4-003	2207	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493490.1	RASSF4-011	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,641 bps, Translation length: 321 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H2L5

CCDS

This transcript is a member of the Human CCDS set: CCDS7208

Version

ENST00000340258.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047745 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340258.5 RASSF4-001

Summary