Transcript: ENST00000478500.1 PIP5K1B-002

Description

phosphatidylinositol-4-phosphate 5-kinase, type I, beta [Source:HGNC Symbol;Acc:8995]

Gene Synonyms

MSS4, STM7

Location

Chromosome 9: 71,357,171-71,624,092 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 10 domains and features, is associated with 104314 variant alleles and maps to 650 oligo probes.

Gene

This transcript is a product of gene ENSG00000107242.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265382.3	PIP5K1B-001	2654	540aa	ENSP00000265382.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6624	B4DIG7 O14986 Q7KYT4 Q7KYT6	NM_003558.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541509.1	PIP5K1B-201	2019	502aa	ENSP00000438082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65063	B4DIG7 Q7KYT4	NM_001278253.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440050.1	PIP5K1B-003	813	157aa	ENSP00000411477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437200.1	PIP5K1B-005	791	162aa	ENSP00000398587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000377284.1	PIP5K1B-004	612	103aa	ENSP00000366498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478500.1	PIP5K1B-002	3335	549aa	ENSP00000435778.1	Nonsense mediated decay		O14986	-	-
ENST00000474356.1	PIP5K1B-007	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472907.2	PIP5K1B-006	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 13, Transcript length: 3,335 bps, Translation length: 549 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14986

Version

ENST00000478500.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052562 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000478500.1 PIP5K1B-002

Summary