Transcript: ENST00000450569.1 AGR2-006

Description

anterior gradient 2 [Source:HGNC Symbol;Acc:328]

Gene Synonyms

AG2, GOB-4, HAG-2, HEL-S-116, PDIA17, XAG-2

Location

Chromosome 7: 16,832,264-16,840,820 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 4114 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000106541.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419304.2	AGR2-001	1778	175aa	ENSP00000391490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5364	C9J3E2 O95994 Q4JM46	NM_006408.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419572.2	AGR2-201	854	195aa	ENSP00000388342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3E2 Q4JM46 Q4JM47	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401412.1	AGR2-005	782	188aa	ENSP00000386025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC07 C9J3E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450569.1	AGR2-006	671	119aa	ENSP00000414806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3Z9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000412973.1	AGR2-007	670	131aa	ENSP00000411969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3E2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486219.1	AGR2-003	117	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468419.1	AGR2-002	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489523.1	AGR2-004	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 671 bps, Translation length: 119 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000450569.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326385 (version 1)

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Transcript: ENST00000450569.1 AGR2-006

Summary