Transcript: ENST00000481483.1 CASP2-006

Description

caspase 2, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1503]

Gene Synonyms

CASP-2, ICH1, NEDD-2, NEDD2, PPP1R57

Location

About this transcript

This transcript has 4 exons, is associated with 1533 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310447.5	CASP2-001	4225	452aa	ENSP00000312664.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5879	B4E0I5 P42575	NM_032983.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392925.2	CASP2-005	616	171aa	ENSP00000376656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRR9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350623.3	CASP2-003	1146	108aa	ENSP00000340030.3	Nonsense mediated decay	CCDS47733	-	-	-
ENST00000493642.1	CASP2-002	2166	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472067.1	CASP2-004	5769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481483.1	CASP2-006	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 575 bps,

Version

ENST00000481483.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327429 (version 1)