Transcript: ENST00000413144.2 PLA2G4C-201

Description

phospholipase A2, group IVC (cytosolic, calcium-independent) [Source:HGNC Symbol;Acc:9037]

Gene Synonyms

CPLA2-gamma, cPLA2-gamma

Location

Chromosome 19: 48,551,600-48,609,786 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 10 domains and features, is associated with 27105 variant alleles and maps to 482 oligo probes.

Gene

This transcript is a product of gene ENSG00000105499.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000599111.1	PLA2G4C-001	2458	551aa	ENSP00000472546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59403	M0R1B4 Q76EY9 Q76EZ0 Q9UP65	NM_003706.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354276.3	PLA2G4C-005	2496	527aa	ENSP00000346228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54286	M0R0F6 M0R1B4 Q76EY9 Q76EZ0 Q9UP65	NM_001159323.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599921.1	PLA2G4C-004	1984	541aa	ENSP00000469473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12710	M0R0F6 M0R1B4 Q76EY9 Q76EZ0 Q9UP65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413144.2	PLA2G4C-201	1626	541aa	ENSP00000400036.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12710	M0R0F6 M0R1B4 Q76EY9 Q76EZ0 Q9UP65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599300.1	PLA2G4C-020	641	213aa	ENSP00000470418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZB1 Q76EY9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000601946.1	PLA2G4C-017	581	193aa	ENSP00000472977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R339	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000596138.1	PLA2G4C-009	516	39aa	ENSP00000471196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0F6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595161.1	PLA2G4C-024	438	130aa	ENSP00000469528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q76EY9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000596352.1	PLA2G4C-010	293	47aa	ENSP00000471759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1B4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597713.1	PLA2G4C-016	669	34aa	ENSP00000473250.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595487.1	PLA2G4C-007	599	36aa	ENSP00000471328.1	Nonsense mediated decay		M0R0M8	-	-
ENST00000598488.1	PLA2G4C-008	298	43aa	ENSP00000468972.1	Nonsense mediated decay		M0QX83	-	-
ENST00000596510.1	PLA2G4C-003	1770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599239.1	PLA2G4C-022	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594156.1	PLA2G4C-011	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000598813.1	PLA2G4C-013	398	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000595899.1	PLA2G4C-014	318	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599063.1	PLA2G4C-002	1255	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594790.1	PLA2G4C-006	876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600170.1	PLA2G4C-012	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598457.1	PLA2G4C-018	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597377.1	PLA2G4C-015	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593765.1	PLA2G4C-021	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596353.1	PLA2G4C-023	456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598185.1	PLA2G4C-019	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 1,626 bps, Translation length: 541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UP65

CCDS

This transcript is a member of the Human CCDS set: CCDS12710

Version

ENST00000413144.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000413144.2 PLA2G4C-201

Summary