Transcript: ENST00000452733.2 CYTH2-001

Description

cytohesin 2 [Source:HGNC Symbol;Acc:9502]

Gene Synonyms

ARNO, CTS18, CTS18.1, PSCD2, PSCD2L, SEC7L, Sec7p-L, Sec7p-like

Location

Chromosome 19: 48,972,289-48,982,639 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 5824 variant alleles and maps to 452 oligo probes.

Gene

This transcript is a product of gene ENSG00000105443.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000427476.1	CYTH2-201	4607	400aa	ENSP00000391648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQA6 M0QZ92	NM_017457.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452733.2	CYTH2-001	1848	399aa	ENSP00000408236.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12722	M0QZ92 Q99418	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000325139.5	CYTH2-007	1087	254aa	ENSP00000314566.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8E2 M0QZ92	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595765.1	CYTH2-010	746	214aa	ENSP00000472602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2J0 Q59F87	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000391881.3	CYTH2-004	1546	292aa	ENSP00000375753.3	Nonsense mediated decay		G5E9B7 M0QZ92	-	-
ENST00000493260.1	CYTH2-002	4652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467412.1	CYTH2-003	2885	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460595.1	CYTH2-009	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474209.1	CYTH2-008	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474049.1	CYTH2-006	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462117.1	CYTH2-005	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,848 bps, Translation length: 399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99418

CCDS

This transcript is a member of the Human CCDS set: CCDS12722

Version

ENST00000452733.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317060 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000452733.2 CYTH2-001

Summary