Transcript: ENST00000253099.6 MRPL4-001

Description

mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:14276]

Gene Synonyms

CGI-28, L4mt

Location

Chromosome 19: 10,362,643-10,370,721 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 4370 variant alleles and maps to 418 oligo probes.

Gene

This transcript is a product of gene ENSG00000105364.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393733.2	MRPL4-003	1620	357aa	ENSP00000377334.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253099.6	MRPL4-001	1455	311aa	ENSP00000253099.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12230	K7EJ73 K7ES61 Q9BYD3	NM_146388.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590669.1	MRPL4-002	1423	263aa	ENSP00000465143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42499	K7EJ73 Q9BYD3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307422.5	MRPL4-201	1320	311aa	ENSP00000306902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12230	K7EJ73 K7ES61 Q9BYD3	NM_146387.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592514.1	MRPL4-006	1118	300aa	ENSP00000468569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ73 K7ES61	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590702.1	MRPL4-008	876	119aa	ENSP00000465050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ73	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588502.1	MRPL4-010	827	220aa	ENSP00000466169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ73 K7ELQ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590150.1	MRPL4-009	747	163aa	ENSP00000466050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591054.1	MRPL4-007	777	127aa	ENSP00000465635.1	Nonsense mediated decay		K7EKI4	-	-
ENST00000592071.1	MRPL4-004	1487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588963.1	MRPL4-005	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,455 bps, Translation length: 311 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYD3

CCDS

This transcript is a member of the Human CCDS set: CCDS12230

Version

ENST00000253099.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451197 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000253099.6 MRPL4-001

Summary