Transcript: ENST00000592242.1 PPP6R1-007

Description

protein phosphatase 6, regulatory subunit 1 [Source:HGNC Symbol;Acc:29195]

Gene Synonyms

KIAA1115, PP6R1, SAP190, SAPS1

Location

Chromosome 19: 55,756,712-55,767,137 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 5219 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000105063.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412770.2	PPP6R1-001	3961	881aa	ENSP00000414202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46186	K7EM28 Q96ID3 Q9UPN7	NM_014931.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587283.1	PPP6R1-002	2953	881aa	ENSP00000467521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46186	K7EM28 Q96ID3 Q9UPN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592242.1	PPP6R1-007	574	157aa	ENSP00000466332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM28	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587457.1	PPP6R1-008	2389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589343.1	PPP6R1-005	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591323.1	PPP6R1-004	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586690.1	PPP6R1-006	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591602.1	PPP6R1-003	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 574 bps, Translation length: 157 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000592242.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452669 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000592242.1 PPP6R1-007

Summary