Transcript: ENST00000595600.1 ARHGEF18-005

Description

Rho/Rac guanine nucleotide exchange factor (GEF) 18 [Source:HGNC Symbol;Acc:17090]

Gene Synonyms

KIAA0521, MGC15913, P114-RhoGEF

Location

About this transcript

This transcript has 2 exons, is associated with 1492 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359920.6	ARHGEF18-001	5733	1173aa	ENSP00000352995.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45946	M0R125 Q6ZSZ5	NM_001130955.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319670.9	ARHGEF18-002	5212	1015aa	ENSP00000319200.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12177	M0R125 Q6ZSZ5	NM_015318.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594665.1	ARHGEF18-003	4616	812aa	ENSP00000470729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000599752.1	ARHGEF18-006	582	86aa	ENSP00000471597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R125	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595600.1	ARHGEF18-005	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 560 bps,

Version

ENST00000595600.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458962 (version 1)