Transcript: ENST00000221418.4 ECH1-001

Description

enoyl CoA hydratase 1, peroxisomal [Source:HGNC Symbol;Acc:3149]

Gene Synonyms

HPXEL

Location

Chromosome 19: 39,306,062-39,322,645 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 8440 variant alleles and maps to 421 oligo probes.

Gene

This transcript is a product of gene ENSG00000104823.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221418.4	ECH1-001	1411	328aa	ENSP00000221418.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33014	M0QXS7 Q13011	NM_001398.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601778.1	ECH1-015	799	267aa	ENSP00000472322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXS7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000595470.1	ECH1-013	560	181aa	ENSP00000470809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXS7 M0QZW4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601094.1	ECH1-009	440	36aa	ENSP00000469354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595567.1	ECH1-008	308	17aa	ENSP00000472378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000602115.1	ECH1-007	209	69aa	ENSP00000470519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZF6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000597205.1	ECH1-005	169	55aa	ENSP00000471738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1A2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594164.1	ECH1-004	677	37aa	ENSP00000470839.1	Nonsense mediated decay		M0QZX8	-	-
ENST00000597805.1	ECH1-006	135	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000600178.1	ECH1-002	1007	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594391.1	ECH1-017	919	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598707.1	ECH1-014	882	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601060.1	ECH1-012	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601333.1	ECH1-018	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598316.1	ECH1-016	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596118.1	ECH1-010	356	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597089.1	ECH1-011	343	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,411 bps, Translation length: 328 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13011

CCDS

This transcript is a member of the Human CCDS set: CCDS33014

Version

ENST00000221418.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000462650 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000221418.4 ECH1-001

Summary