Transcript: ENST00000518067.1 KCTD9-003

Description

potassium channel tetramerization domain containing 9 [Source:HGNC Symbol;Acc:22401]

Gene Synonyms

BTBD27, FLJ20038

Location

Chromosome 8: 25,296,872-25,315,928 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 8233 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000104756.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221200.4	KCTD9-001	3398	389aa	ENSP00000221200.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6048	K7ENB5 Q7L273	NM_017634.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519665.1	KCTD9-011	2128	57aa	ENSP00000466874.1	Nonsense mediated decay		K7ENB5	-	-
ENST00000523140.1	KCTD9-009	840	62aa	ENSP00000467904.1	Nonsense mediated decay		K7ENB5 K7EQN1	-	-
ENST00000518067.1	KCTD9-003	849	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518997.1	KCTD9-002	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517914.1	KCTD9-005	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522493.1	KCTD9-007	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524217.1	KCTD9-010	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521458.1	KCTD9-008	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523294.1	KCTD9-006	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520405.1	KCTD9-004	333	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 849 bps,

Version

ENST00000518067.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375808 (version 1)

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Transcript: ENST00000518067.1 KCTD9-003

Summary