Transcript: ENST00000523582.1 TRPA1-002

Description

transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]

Gene Synonyms

ANKTM1, FEPS

Location

About this transcript

This transcript has 24 exons, is annotated with 41 domains and features, is associated with 19972 variant alleles and maps to 656 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262209.4	TRPA1-001	5223	1119aa	ENSP00000262209.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34908	O75762	NM_007332.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523582.1	TRPA1-002	2812	916aa	ENSP00000428151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAW0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519720.1	TRPA1-006	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520596.2	TRPA1-007	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520788.1	TRPA1-004	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522271.1	TRPA1-005	366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,812 bps, Translation length: 916 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000523582.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379077 (version 1)