Transcript: ENST00000527715.1 CTSH-005

Description

cathepsin H [Source:HGNC Symbol;Acc:2535]

Gene Synonyms

ACC-4, ACC-5, CPSB, minichain

Location

Chromosome 15: 79,214,107-79,219,246 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2905 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSG00000103811.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220166.5	CTSH-001	2190	335aa	ENSP00000220166.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10308	E9PKT6 P09668 Q68D46	NM_004390.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528741.1	CTSH-007	719	134aa	ENSP00000435329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKT6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533777.1	CTSH-003	2101	62aa	ENSP00000431879.1	Nonsense mediated decay		-	-	-
ENST00000525807.1	CTSH-002	1122	118aa	ENSP00000432935.1	Nonsense mediated decay		E9PN60	-	-
ENST00000529861.1	CTSH-008	857	41aa	ENSP00000432893.1	Nonsense mediated decay		E9PN84	-	-
ENST00000534533.1	CTSH-014	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534237.1	CTSH-017	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534268.1	CTSH-011	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534038.1	CTSH-009	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528191.1	CTSH-015	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528436.1	CTSH-010	268	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527715.1	CTSH-005	2138	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527138.1	CTSH-018	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529263.2	CTSH-019	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529612.1	CTSH-016	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530010.1	CTSH-012	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530929.1	CTSH-006	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,138 bps,

Version

ENST00000527715.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384330 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000527715.1 CTSH-005

Summary