Transcript: ENST00000561508.1 PYCARD-003

Description

PYD and CARD domain containing [Source:HGNC Symbol;Acc:16608]

Gene Synonyms

ASC, CARD5, TMS, TMS-1, TMS1

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 774 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000561508.1	PYCARD-003	1137	125aa	ENSP00000455141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000247470.9	PYCARD-001	990	195aa	ENSP00000247470.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10708	Q9ULZ3	NM_013258.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350605.4	PYCARD-002	696	176aa	ENSP00000340441.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10709	Q9ULZ3	NM_145182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565022.1	PYCARD-004	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,137 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000561508.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433565 (version 1)