Transcript: ENST00000399410.3 ABCC1-001

Description

ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:HGNC Symbol;Acc:51]

Gene Synonyms

ABC29, ABCC, GS-X, MRP, MRP1

Location

Chromosome 16: 16,043,434-16,236,919 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 46 domains and features, is associated with 98128 variant alleles and maps to 1077 oligo probes.

Gene

This transcript is a product of gene ENSG00000103222.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399408.2	ABCC1-205	6594	1541aa	ENSP00000382340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P33527 Q9BV39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399410.3	ABCC1-001	6552	1531aa	ENSP00000382342.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42122	P33527 Q9BV39	NM_004996.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346370.5	ABCC1-202	6396	1475aa	ENSP00000263019.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P33527 Q9BV39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351154.5	ABCC1-204	6387	1472aa	ENSP00000263017.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P33527 Q9BV39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345148.5	ABCC1-201	6369	1466aa	ENSP00000263014.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P33527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349029.5	ABCC1-203	6219	1416aa	ENSP00000263016.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P33527 Q9BV39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572882.1	ABCC1-007	4565	1440aa	ENSP00000461615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BV39	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572053.1	ABCC1-005	744	22aa	ENSP00000459693.1	Nonsense mediated decay		I3L2H9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000576557.1	ABCC1-004	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574224.1	ABCC1-002	1543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575422.1	ABCC1-003	1198	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574761.1	ABCC1-006	996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 31, Coding exons: 31, Transcript length: 6,552 bps, Translation length: 1,531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P33527

CCDS

This transcript is a member of the Human CCDS set: CCDS42122

Version

ENST00000399410.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000109701 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000399410.3 ABCC1-001

Summary