Transcript: ENST00000355854.4 CAB39L-001

Description

calcium binding protein 39-like [Source:HGNC Symbol;Acc:20290]

Gene Synonyms

FLJ12577, MO25-BETA, MO2L, bA103J18.3

Location

Chromosome 13: 49,882,786-49,975,735 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 37118 variant alleles and maps to 582 oligo probes.

Gene

This transcript is a product of gene ENSG00000102547.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355854.4	CAB39L-001	3676	337aa	ENSP00000348113.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9416	B7ZBJ4 B7ZBJ5 B7ZBJ6 Q9H9S4	NM_030925.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347776.5	CAB39L-201	3520	337aa	ENSP00000261669.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9416	B7ZBJ4 B7ZBJ5 B7ZBJ6 Q9H9S4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409308.1	CAB39L-003	2416	337aa	ENSP00000386375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9416	B7ZBJ4 B7ZBJ5 B7ZBJ6 Q9H9S4	NM_001079670.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410043.1	CAB39L-005	1627	337aa	ENSP00000386328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9416	B7ZBJ4 B7ZBJ5 B7ZBJ6 Q9H9S4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409130.1	CAB39L-006	1411	193aa	ENSP00000387245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425242.1	CAB39L-002	1035	280aa	ENSP00000416719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TAW7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457041.1	CAB39L-010	727	188aa	ENSP00000409253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBJ5 B7ZBJ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413278.1	CAB39L-008	633	128aa	ENSP00000404028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBJ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000409082.1	CAB39L-009	468	93aa	ENSP00000386979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476943.1	CAB39L-004	895	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470410.1	CAB39L-007	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,676 bps, Translation length: 337 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H9S4

CCDS

This transcript is a member of the Human CCDS set: CCDS9416

Version

ENST00000355854.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044908 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000355854.4 CAB39L-001

Summary