Transcript: ENST00000380087.2 RBBP7-006

Description

retinoblastoma binding protein 7 [Source:HGNC Symbol;Acc:9890]

Gene Synonyms

RBAP46, RbAp46

Location

Chromosome X: 16,862,464-16,888,537 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 28 domains and features, is associated with 9634 variant alleles and maps to 544 oligo probes.

Gene

This transcript is a product of gene ENSG00000102054.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380087.2	RBBP7-006	2333	425aa	ENSP00000369427.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14179	C9J7L0 Q16576 Q5JNZ6 Q6FHQ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380084.4	RBBP7-008	2036	469aa	ENSP00000369424.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56598	C9J7L0 Q16576 Q5JNZ6	NM_001198719.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404022.1	RBBP7-010	1904	416aa	ENSP00000386068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L0 E9PC52 Q5JNZ6	NM_002893.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416035.1	RBBP7-004	857	285aa	ENSP00000392714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JP01	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000444437.1	RBBP7-002	763	175aa	ENSP00000402796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JP02	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468092.1	RBBP7-013	630	67aa	ENSP00000417791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425696.1	RBBP7-007	373	85aa	ENSP00000415747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JNZ6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493145.1	RBBP7-012	212	37aa	ENSP00000417507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAJ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465244.1	RBBP7-011	4031	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486166.1	RBBP7-001	1535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000330735.3	RBBP7-003	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481586.1	RBBP7-009	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,333 bps, Translation length: 425 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16576

CCDS

This transcript is a member of the Human CCDS set: CCDS14179

Version

ENST00000380087.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055920 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380087.2 RBBP7-006

Summary