Transcript: ENST00000371122.4 SMARCA1-004

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:11097]

Gene Synonyms

ISWI, NURF140, SNF2L, SNF2L1, SNF2LB, SNF2LT, SWI, SWI2

Location

About this transcript

This transcript has 25 exons, is annotated with 28 domains and features, is associated with 22485 variant alleles and maps to 1143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371122.4	SMARCA1-004	4099	1054aa	ENSP00000360163.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14612	F6TQG2 P28370	NM_003069.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371121.3	SMARCA1-201	4048	1042aa	ENSP00000360162.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48164	P28370	NM_139035.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371123.1	SMARCA1-002	3995	1042aa	ENSP00000360164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48164	P28370	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478420.1	SMARCA1-003	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 4,099 bps, Translation length: 1,054 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28370

CCDS

This transcript is a member of the Human CCDS set: CCDS14612

Version

ENST00000371122.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058206 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.