Transcript: ENST00000370576.4 MCF2-002

Description

MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:6940]

Gene Synonyms

ARHGEF21, DBL

Location

Chromosome X: 138,663,930-138,724,887 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 21 domains and features, is associated with 18242 variant alleles and maps to 858 oligo probes.

Gene

This transcript is a product of gene ENSG00000101977.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000520602.1	MCF2-001	3945	985aa	ENSP00000427745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48175	P10911 Q5JYJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370578.4	MCF2-201	3913	1070aa	ENSP00000359610.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYJ5 Q5JYJ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414978.1	MCF2-202	3813	985aa	ENSP00000397055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48175	P10911 Q5JYJ5	NM_001099855.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370576.4	MCF2-002	3688	925aa	ENSP00000359608.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14667	P10911 Q5JYJ5	NM_005369.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536274.1	MCF2-203	3461	821aa	ENSP00000438155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55514	P10911	NM_001171878.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519895.1	MCF2-008	3346	1001aa	ENSP00000430276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55517	P10911	NM_001171876.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338585.6	MCF2-004	2826	941aa	ENSP00000342204.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55516	P10911	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370573.4	MCF2-003	2583	860aa	ENSP00000359605.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55515	P10911	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437564.1	MCF2-006	1988	429aa	ENSP00000403271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000446225.1	MCF2-005	1916	528aa	ENSP00000405848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYJ5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483690.1	MCF2-007	752	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,688 bps, Translation length: 925 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10911

CCDS

This transcript is a member of the Human CCDS set: CCDS14667

Version

ENST00000370576.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058560 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000370576.4 MCF2-002

Summary