Transcript: ENST00000376687.3 SUV39H1-001

Description

suppressor of variegation 3-9 homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:11479]

Gene Synonyms

H3-K9-HMTase 1, KMT1A, MG44, SUV39H

Location

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 3849 variant alleles and maps to 480 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376687.3	SUV39H1-001	2871	412aa	ENSP00000365877.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14304	O43463	NM_003173.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337852.6	SUV39H1-201	1773	423aa	ENSP00000337976.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65252	B4DST0	NM_001282166.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453214.2	SUV39H1-202	1730	184aa	ENSP00000410686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DP90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482260.1	SUV39H1-002	778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462786.1	SUV39H1-003	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,871 bps, Translation length: 412 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43463

CCDS

This transcript is a member of the Human CCDS set: CCDS14304

Version

ENST00000376687.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058909 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.