Transcript: ENST00000581075.1 MYOM1-004

Description

myomesin 1 [Source:HGNC Symbol;Acc:7613]

Gene Synonyms

SKELEMIN

Location

Chromosome 18: 3,075,736-3,090,764 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 6616 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000101605.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356443.4	MYOM1-001	5847	1685aa	ENSP00000348821.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45824	P52179	NM_019856.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400569.3	MYOM1-201	5847	1685aa	ENSP00000383413.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MX12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261606.7	MYOM1-003	5154	1589aa	ENSP00000261606.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45823	P52179	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581075.1	MYOM1-004	684	121aa	ENSP00000462039.1	Nonsense mediated decay		J3KRK2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582016.1	MYOM1-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581804.1	MYOM1-006	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577294.1	MYOM1-002	754	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 684 bps, Translation length: 121 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000581075.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441281 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000581075.1 MYOM1-004

Summary