Transcript: ENST00000462438.1 RAE1-004

Description

ribonucleic acid export 1 [Source:HGNC Symbol;Acc:9828]

Gene Synonyms

MIG14, MRNP41, Mnrp41, dJ481F12.3, dJ800J21.1

Location

Chromosome 20: 55,946,190-55,953,519 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3525 variant alleles and maps to 416 oligo probes.

Gene

This transcript is a product of gene ENSG00000101146.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395841.2	RAE1-001	2639	368aa	ENSP00000379182.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13458	B0QZ36 B0QZ37 P78406	NM_003610.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395840.2	RAE1-003	2602	368aa	ENSP00000379181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13458	B0QZ36 B0QZ37 P78406	NM_001015885.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371242.2	RAE1-002	2362	368aa	ENSP00000360286.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13458	B0QZ36 B0QZ37 P78406	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527947.1	RAE1-010	1503	437aa	ENSP00000432609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZ36 B0QZ37 E9PQ57	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452119.1	RAE1-005	691	87aa	ENSP00000402924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZ37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000411894.1	RAE1-006	588	137aa	ENSP00000392097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZ36 B0QZ37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429339.1	RAE1-007	480	137aa	ENSP00000393264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QZ36 B0QZ37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492498.1	RAE1-008	1156	217aa	ENSP00000432698.1	Nonsense mediated decay		B0QZ36 B0QZ37 E9PPG9	-	-
ENST00000462438.1	RAE1-004	3251	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,251 bps,

Version

ENST00000462438.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000259501 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000462438.1 RAE1-004

Summary