Transcript: ENST00000262238.4 YY1-001

Description

YY1 transcription factor [Source:HGNC Symbol;Acc:12856]

Gene Synonyms

DELTA, INO80S, NF-E1, UCRBP, YIN-YANG-1

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 21985 variant alleles and maps to 975 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262238.4	YY1-001	6697	414aa	ENSP00000262238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9957	G3V3M8 P25490	NM_003403.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554804.1	YY1-004	1114	190aa	ENSP00000452225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554371.1	YY1-006	636	34aa	ENSP00000451329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3M8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553625.1	YY1-003	422	123aa	ENSP00000452140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554579.1	YY1-005	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 6,697 bps, Translation length: 414 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25490

CCDS

This transcript is a member of the Human CCDS set: CCDS9957

Version

ENST00000262238.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318277 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.