Transcript: ENST00000418736.2 RPS6KA5-003

Description

ribosomal protein S6 kinase, 90kDa, polypeptide 5 [Source:HGNC Symbol;Acc:10434]

Gene Synonyms

MSK1, MSPK1, RLPK

Location

About this transcript

This transcript has 13 exons, is annotated with 20 domains and features, is associated with 69800 variant alleles and maps to 394 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261991.3	RPS6KA5-001	4202	802aa	ENSP00000261991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9893	B7Z2Y5 O75582 Q9UG98	NM_004755.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536315.2	RPS6KA5-004	2993	723aa	ENSP00000442803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2Y5 Q9UG98	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418736.2	RPS6KA5-003	2249	549aa	ENSP00000402787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45149	O75582	NM_182398.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556178.1	RPS6KA5-005	2118	79aa	ENSP00000451305.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554206.1	RPS6KA5-002	1420	219aa	ENSP00000450591.1	Nonsense mediated decay		G3V2D1	-	-
ENST00000556594.1	RPS6KA5-006	596	83aa	ENSP00000451736.1	Nonsense mediated decay		G3V4D7	-	-
ENST00000556304.1	RPS6KA5-007	278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,249 bps, Translation length: 549 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75582

CCDS

This transcript is a member of the Human CCDS set: CCDS45149

Version

ENST00000418736.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000411444 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.