Transcript: ENST00000555067.1 VRK1-004

Description

vaccinia related kinase 1 [Source:HGNC Symbol;Acc:12718]

Gene Synonyms

PCH1, PCH1A

Location

About this transcript

This transcript has 4 exons, is associated with 9258 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216639.3	VRK1-001	1745	396aa	ENSP00000216639.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9947	Q99986	NM_003384.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557222.1	VRK1-003	1029	232aa	ENSP00000450820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557352.1	VRK1-006	599	176aa	ENSP00000451682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553683.1	VRK1-005	247	65aa	ENSP00000451412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555067.1	VRK1-004	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555402.1	VRK1-007	415	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555351.1	VRK1-002	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 604 bps,

Version

ENST00000555067.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413524 (version 1)