Transcript: ENST00000545908.1 MTHFD1-002

Description

methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:HGNC Symbol;Acc:7432]

Gene Synonyms

MTHFC, MTHFD

Location

Chromosome 14: 64,854,749-64,926,722 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 34 domains and features, is associated with 30432 variant alleles and maps to 853 oligo probes.

Gene

This transcript is a product of gene ENSG00000100714.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000545908.1	MTHFD1-002	3361	1020aa	ENSP00000438588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2F4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000216605.8	MTHFD1-019	3135	935aa	ENSP00000216605.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9763	P11586	NM_005956.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555709.2	MTHFD1-001	803	261aa	ENSP00000450560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P11586	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554739.1	MTHFD1-015	688	23aa	ENSP00000477359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557370.2	MTHFD1-014	571	107aa	ENSP00000477199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554768.1	MTHFD1-005	563	25aa	ENSP00000477501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557539.1	MTHFD1-006	509	68aa	ENSP00000476468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556284.1	MTHFD1-012	932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553391.2	MTHFD1-011	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554057.1	MTHFD1-010	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555252.1	MTHFD1-003	2053	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553405.1	MTHFD1-008	833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556771.1	MTHFD1-018	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554677.1	MTHFD1-009	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554353.1	MTHFD1-013	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555858.1	MTHFD1-007	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 3,361 bps, Translation length: 1,020 residues

Version

ENST00000545908.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412167 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000545908.1 MTHFD1-002

Summary