Transcript: ENST00000533541.1 SLC8A3-008

Description

solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:HGNC Symbol;Acc:11070]

Gene Synonyms

NCX3

Location

Chromosome 14: 70,512,792-70,546,897 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 14795 variant alleles and maps to 301 oligo probes.

Gene

This transcript is a product of gene ENSG00000100678.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381269.2	SLC8A3-003	5268	927aa	ENSP00000370669.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35498	P57103 Q86TQ9	NM_183002.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357887.3	SLC8A3-201	5262	925aa	ENSP00000350560.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9799	P57103 Q86TQ9	NM_033262.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356921.2	SLC8A3-001	5250	921aa	ENSP00000349392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9800	P57103 Q86TQ9	NM_182932.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533541.1	SLC8A3-008	3409	210aa	ENSP00000437103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z391	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000216568.7	SLC8A3-006	2916	298aa	ENSP00000216568.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45131	P57103	NM_001130417.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528359.1	SLC8A3-005	2840	925aa	ENSP00000433531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9799	P57103 Q86TQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534137.1	SLC8A3-004	2837	924aa	ENSP00000436688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53904	P57103 Q86TQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394330.2	SLC8A3-007	2622	284aa	ENSP00000377863.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41967	P57103	NM_182936.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494208.1	SLC8A3-002	5146	620aa	ENSP00000436332.1	Nonsense mediated decay		P57103 Q86TQ9	-	-
ENST00000533899.1	SLC8A3-009	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,409 bps, Translation length: 210 residues

Version

ENST00000533541.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000390741 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000533541.1 SLC8A3-008

Summary