Transcript: ENST00000418446.2 ABHD4-007

Description

abhydrolase domain containing 4 [Source:HGNC Symbol;Acc:20154]

Gene Synonyms

ABH4, FLJ12816

Location

Chromosome 14: 23,067,213-23,079,980 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 5430 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000100439.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428304.2	ABHD4-001	2510	342aa	ENSP00000414558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9572	B4DW04 F5H6T0 Q8TB40	NM_022060.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000216327.6	ABHD4-010	753	237aa	ENSP00000216327.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KMW0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542041.1	ABHD4-006	465	90aa	ENSP00000437385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6T0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545034.1	ABHD4-008	185	44aa	ENSP00000444550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZC9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418446.2	ABHD4-007	1003	181aa	ENSP00000388751.2	Nonsense mediated decay		B4DDH7 B4DW04 F5H6T0	-	-
ENST00000541962.1	ABHD4-011	662	54aa	ENSP00000438014.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537243.1	ABHD4-009	550	85aa	ENSP00000438332.1	Nonsense mediated decay		F5H067	-	-
ENST00000544562.1	ABHD4-005	929	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489928.1	ABHD4-003	507	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539344.1	ABHD4-004	986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,003 bps, Translation length: 181 residues

Version

ENST00000418446.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401545 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000418446.2 ABHD4-007

Summary