Transcript: ENST00000466589.1 L3MBTL2-004

Description

l(3)mbt-like 2 (Drosophila) [Source:HGNC Symbol;Acc:18594]

Gene Synonyms

DKFZP761I141, H-l(3)mbt-l, L3MBT, dJ756G23.3

Location

Chromosome 22: 41,601,313-41,626,658 forward strand.

About this transcript

This transcript has 16 exons, is associated with 12392 variant alleles and maps to 535 oligo probes.

Gene

This transcript is a product of gene ENSG00000100395.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216237.5	L3MBTL2-001	3296	705aa	ENSP00000216237.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14011	Q969R5	NM_031488.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449635.1	L3MBTL2-008	864	288aa	ENSP00000399405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000452106.1	L3MBTL2-005	3282	614aa	ENSP00000414423.1	Nonsense mediated decay		Q969R5	-	-
ENST00000450939.1	L3MBTL2-009	946	232aa	ENSP00000403767.1	Nonsense mediated decay		H7C228	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453659.1	L3MBTL2-007	531	40aa	ENSP00000405849.1	Nonsense mediated decay		F8WBL1	-	-
ENST00000489136.1	L3MBTL2-006	751	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479978.1	L3MBTL2-002	5875	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466589.1	L3MBTL2-004	3055	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481902.1	L3MBTL2-003	2432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 0, Transcript length: 3,055 bps,

Version

ENST00000466589.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320616 (version 1)

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Transcript: ENST00000466589.1 L3MBTL2-004

Summary