Transcript: ENST00000216218.3 ST13-001

Description

suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343]

Gene Synonyms

AAG2, FAM10A1, FAM10A4, HIP, HOP, HSPABP, HSPABP1, P48, PRO0786, SNC6

Location

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 16034 variant alleles and maps to 874 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216218.3	ST13-001	3595	369aa	ENSP00000216218.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14006	B4E0U6 B7ZA40 F6VDH7 P50502 Q0IJ56	NM_003932.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411695.1	ST13-003	549	162aa	ENSP00000392067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6VDH7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455824.1	ST13-002	798	38aa	ENSP00000397062.1	Nonsense mediated decay		F8WAQ7	-	-
ENST00000413424.1	ST13-004	630	146aa	ENSP00000412049.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480048.1	ST13-005	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495652.1	ST13-006	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,595 bps, Translation length: 369 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50502

CCDS

This transcript is a member of the Human CCDS set: CCDS14006

Version

ENST00000216218.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000321759 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.