Transcript: ENST00000406423.1 ANKRD54-010

Description

ankyrin repeat domain 54 [Source:HGNC Symbol;Acc:25185]

Gene Synonyms

LIAR

Location

Chromosome 22: 38,227,832-38,239,889 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 5813 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000100124.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215941.4	ANKRD54-001	2184	300aa	ENSP00000215941.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13959	Q6NXT1	NM_138797.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406423.1	ANKRD54-010	954	180aa	ENSP00000384392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411961.2	ANKRD54-004	946	284aa	ENSP00000405782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609454.1	ANKRD54-013	825	107aa	ENSP00000477088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434930.1	ANKRD54-005	735	216aa	ENSP00000387507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458278.2	ANKRD54-006	623	208aa	ENSP00000412534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000424350.1	ANKRD54-003	597	90aa	ENSP00000393035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX82	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413497.1	ANKRD54-008	794	178aa	ENSP00000391744.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407117.2	ANKRD54-007	789	156aa	ENSP00000385180.2	Nonsense mediated decay		C9JX82 F8WB76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498417.1	ANKRD54-002	2403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609706.1	ANKRD54-014	1140	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464849.1	ANKRD54-009	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 954 bps, Translation length: 180 residues

Version

ENST00000406423.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319499 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000406423.1 ANKRD54-010

Summary