Transcript: ENST00000215587.7 POLR2E-001

Description

polymerase (RNA) II (DNA directed) polypeptide E, 25kDa [Source:HGNC Symbol;Acc:9192]

Gene Synonyms

RPABC1, RPB5, XAP4, hRPB25, hsRPB5

Location

Chromosome 19: 1,088,147-1,095,598 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 5715 variant alleles and maps to 457 oligo probes.

Gene

This transcript is a product of gene ENSG00000099817.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215587.7	POLR2E-001	1504	210aa	ENSP00000215587.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12056	B4DJ89 E5KT65 P19388	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586746.1	POLR2E-010	799	210aa	ENSP00000464739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12056	B4DJ89 E5KT65 P19388	NM_002695.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591767.1	POLR2E-002	1041	68aa	ENSP00000465066.1	Nonsense mediated decay		K7EJ87	-	-
ENST00000589737.1	POLR2E-006	588	51aa	ENSP00000467905.1	Nonsense mediated decay		K7EQN2	-	-
ENST00000590060.1	POLR2E-009	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585838.1	POLR2E-007	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586817.1	POLR2E-003	2441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586215.1	POLR2E-008	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591709.1	POLR2E-005	685	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592597.1	POLR2E-004	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,504 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19388

CCDS

This transcript is a member of the Human CCDS set: CCDS12056

Version

ENST00000215587.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000458044 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000215587.7 POLR2E-001

Summary