Transcript: ENST00000374821.5 NRP1-004

Description

neuropilin 1 [Source:HGNC Symbol;Acc:8004]

Gene Synonyms

BDCA4, CD304, DKFZp686M1967, NP1, NRP, VEGF165R

Location

Chromosome 10: 33,486,549-33,623,450 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 59371 variant alleles and maps to 307 oligo probes.

Gene

This transcript is a product of gene ENSG00000099250.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265371.4	NRP1-001	5882	923aa	ENSP00000265371.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7177	O14786 Q7Z5M2 Q9H2D7 Q9H2D8 Q9H2D9 Q9H2E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374867.2	NRP1-202	5877	923aa	ENSP00000364001.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7177	O14786 Q7Z5M2 Q9H2D7 Q9H2D8 Q9H2D9 Q9H2E0	NM_003873.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374875.1	NRP1-002	5407	735aa	ENSP00000364009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWQ6 Q9H2D7 Q9H2D9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432372.2	NRP1-006	4137	597aa	ENSP00000408911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWQ4 Q7Z5M2 Q9H2D9 Q9H2E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374823.5	NRP1-005	3737	704aa	ENSP00000363956.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7F0 Q7Z5M2 Q9H2D9 Q9H2E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374816.3	NRP1-201	2804	641aa	ENSP00000363949.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX60 Q7Z5M2 Q9H2D9 Q9H2E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395995.1	NRP1-203	2721	906aa	ENSP00000379317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEP6 Q5JWQ2 Q7Z5M2 Q9H2D7 Q9H2D8 Q9H2D9 Q9H2E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374822.4	NRP1-003	2213	644aa	ENSP00000363955.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31180	O14786 Q7Z5M2 Q9H2D8 Q9H2D9 Q9H2E0	NM_001024628.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374821.5	NRP1-004	1988	609aa	ENSP00000363954.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31179	O14786 Q7Z5M2 Q9H2D9 Q9H2E0	NM_001024629.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418675.1	NRP1-008	574	77aa	ENSP00000416147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466932.1	NRP1-010	523	60aa	ENSP00000476896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000455749.1	NRP1-011	518	170aa	ENSP00000390567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2D9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000413802.1	NRP1-009	497	105aa	ENSP00000390447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWQ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000431894.1	NRP1-007	372	100aa	ENSP00000393071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9H2D8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,988 bps, Translation length: 609 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14786

CCDS

This transcript is a member of the Human CCDS set: CCDS31179

Version

ENST00000374821.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000051206 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374821.5 NRP1-004

Summary