Transcript: ENST00000555215.1 HNRNPC-028

Description

heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:5035]

Gene Synonyms

C1, C2, HNRNP, HNRPC, SNRPC, hnRNPC

Location

Chromosome 14: 21,681,120-21,737,568 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 30977 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSG00000092199.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000430246.2	HNRNPC-015	4501	293aa	ENSP00000442816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45079	G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5V7 G3V5X6 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336053.6	HNRNPC-001	3301	288aa	ENSP00000338095.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY08 G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5X6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320084.7	HNRNPC-201	3248	306aa	ENSP00000319690.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41915	G3V2H6 G3V4M8 G3V555 G3V575 P07910	NM_001077442.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449098.1	HNRNPC-202	3187	293aa	ENSP00000404559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45079	G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5V7 G3V5X6 P07910	NM_001077443.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554969.1	HNRNPC-017	1924	293aa	ENSP00000450725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45079	G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5V7 G3V5X6 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553753.1	HNRNPC-014	1790	288aa	ENSP00000450548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY08 G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5X6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554455.1	HNRNPC-005	1784	306aa	ENSP00000451291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41915	G3V2H6 G3V4M8 G3V555 G3V575 P07910	NM_031314.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555309.1	HNRNPC-010	1714	305aa	ENSP00000450790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V2Q1 G3V4M8 G3V555 G3V575	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555914.1	HNRNPC-011	1658	292aa	ENSP00000451708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V251 G3V2H6 G3V3K6 G3V4C1 G3V4M8 G3V5X6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556142.1	HNRNPC-020	1599	231aa	ENSP00000451187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8 G3V555 G3V575 G3V576	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420743.2	HNRNPC-006	1559	306aa	ENSP00000404848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41915	G3V2H6 G3V4M8 G3V555 G3V575 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556513.1	HNRNPC-018	1403	231aa	ENSP00000452214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8 G3V555 G3V575 G3V576	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553300.1	HNRNPC-002	1375	293aa	ENSP00000450544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45079	G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5V7 G3V5X6 P07910	NM_004500.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557201.1	HNRNPC-007	1371	306aa	ENSP00000452276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41915	G3V2H6 G3V4M8 G3V555 G3V575 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556897.1	HNRNPC-019	1252	293aa	ENSP00000451176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45079	G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5V7 G3V5X6 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555883.1	HNRNPC-016	1182	250aa	ENSP00000450629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V251 G3V2H6 G3V3K6 G3V4M8 G3V5X6 P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556628.1	HNRNPC-022	1156	226aa	ENSP00000451652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P07910	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554383.1	HNRNPC-027	1039	262aa	ENSP00000452021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V251 G3V2H6 G3V3K6 G3V4M8 G3V4W0 G3V5X6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555137.1	HNRNPC-033	789	175aa	ENSP00000452185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8 G3V555	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555215.1	HNRNPC-028	781	187aa	ENSP00000452213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8 G3V555 G3V575	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554539.1	HNRNPC-021	748	180aa	ENSP00000452545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5V7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557157.1	HNRNPC-037	698	214aa	ENSP00000450601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2D6 G3V5V7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554891.1	HNRNPC-030	644	126aa	ENSP00000450467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V251 G3V2H6 G3V3K6 G3V4M8 G3V5X6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556226.1	HNRNPC-035	629	121aa	ENSP00000451292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V3K6 G3V4M8 G3V5X6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557768.1	HNRNPC-036	599	54aa	ENSP00000450669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557336.1	HNRNPC-029	580	66aa	ENSP00000451892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555176.1	HNRNPC-034	531	117aa	ENSP00000452573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H6 G3V4M8 G3V5X6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557442.1	HNRNPC-008	1308	147aa	ENSP00000452599.1	Nonsense mediated decay		B4DSU6 G3V2H6 G3V4M8	-	-
ENST00000555127.1	HNRNPC-026	929	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557033.1	HNRNPC-023	760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553444.1	HNRNPC-032	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554417.1	HNRNPC-025	691	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555585.1	HNRNPC-031	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553614.1	HNRNPC-024	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 781 bps, Translation length: 187 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000555215.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410246 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000555215.1 HNRNPC-028

Summary