Transcript: ENST00000576905.1 NLRP1-014

Description

NLR family, pyrin domain containing 1 [Source:HGNC Symbol;Acc:14374]

Gene Synonyms

CARD7, CIDED, CLR17.1, DEFCAP, DEFCAP-L/S, DKFZp586O1822, KIAA0926, NAC, NALP1, PP1044, SLEV1, VAMAS1

Location

Chromosome 17: 5,487,171-5,522,744 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 14703 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene ENSG00000091592.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000572272.1	NLRP1-011	4422	1473aa	ENSP00000460475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42246	I3L0S2 I3L2G5 Q9C000	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345221.3	NLRP1-201	5480	1429aa	ENSP00000324366.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42245	I3L0S2 I3L2G5 Q9C000	NM_033007.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262467.5	NLRP1-001	5131	1375aa	ENSP00000262467.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32537	E9PE50 I3L0S2 Q9H5Z7	NM_001033053.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000269280.4	NLRP1-010	5075	1429aa	ENSP00000269280.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42245	I3L0S2 I3L2G5 Q9C000	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354411.3	NLRP1-012	4332	1443aa	ENSP00000346390.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42244	I3L0S2 Q9C000	NM_033006.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577119.1	NLRP1-009	4200	1399aa	ENSP00000460216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58508	I3L0S2 Q9C000	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576905.1	NLRP1-014	555	35aa	ENSP00000458303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0S2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571451.2	NLRP1-008	5444	1051aa	ENSP00000459661.2	Nonsense mediated decay		I3L0S2 I3L2G5	-	-
ENST00000544378.2	NLRP1-002	5281	1375aa	ENSP00000442029.2	Nonsense mediated decay	CCDS32537	E9PE50 I3L0S2 Q9H5Z7	-	-
ENST00000571307.1	NLRP1-007	4050	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574406.1	NLRP1-003	1750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568641.1	NLRP1-004	1627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572143.1	NLRP1-013	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574512.1	NLRP1-005	4506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 555 bps, Translation length: 35 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000576905.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439521 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000576905.1 NLRP1-014

Summary