Transcript: ENST00000476149.1 DDX18-005

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741]

Gene Synonyms

MrDb

Location

About this transcript

This transcript has 5 exons, is associated with 3923 variant alleles and maps to 499 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263239.2	DDX18-001	3796	670aa	ENSP00000263239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2120	Q4ZG72 Q53TI6 Q9NVP1	NM_006773.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415038.1	DDX18-003	644	214aa	ENSP00000415604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C452	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000474694.1	DDX18-006	1083	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476149.1	DDX18-005	5674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489933.1	DDX18-002	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461443.1	DDX18-004	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 5,674 bps,

Version

ENST00000476149.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000145672 (version 4)