Transcript: ENST00000588251.1 SEH1L-009

Description

SEH1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30379]

Gene Synonyms

SEC13L, SEH1, SEH1A, SEH1B, Seh1

Location

Chromosome 18: 12,948,504-12,971,248 forward strand.

About this transcript

This transcript has 5 exons, is associated with 10437 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000085415.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262124.11	SEH1L-001	3494	360aa	ENSP00000262124.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45832	K7EPZ5 Q96EE3	NM_031216.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399892.2	SEH1L-002	1846	421aa	ENSP00000382779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32791	K7EPZ5 Q96EE3	NM_001013437.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587761.1	SEH1L-008	863	263aa	ENSP00000466234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELV2 K7EPZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592170.1	SEH1L-005	787	77aa	ENSP00000467605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589446.1	SEH1L-006	655	189aa	ENSP00000467276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP88	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585730.1	SEH1L-007	582	158aa	ENSP00000466959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592582.1	SEH1L-003	4072	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588251.1	SEH1L-009	789	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590843.1	SEH1L-004	5206	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590032.1	SEH1L-010	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 789 bps,

Version

ENST00000588251.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458259 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000588251.1 SEH1L-009

Summary