Transcript: ENST00000487078.1 AGBL5-001

Description

ATP/GTP binding protein-like 5 [Source:HGNC Symbol;Acc:26147]

Gene Synonyms

CCP5, FLJ21839

Location

Chromosome 2: 27,274,514-27,293,490 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 9357 variant alleles and maps to 611 oligo probes.

Gene

This transcript is a product of gene ENSG00000084693.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360131.4	AGBL5-004	3177	886aa	ENSP00000353249.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1732	C9JCE1 C9JHM6 C9JQG9 C9JTY1 Q8NDL9	NM_021831.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323064.8	AGBL5-005	2382	717aa	ENSP00000323681.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42665	C9JCE1 C9JHM6 C9JQG9 C9JTY1 Q8NDL9	NM_001035507.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453161.1	AGBL5-006	673	157aa	ENSP00000394730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCE1 C9JHM6 C9JQG9 C9JTY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451003.1	AGBL5-008	581	66aa	ENSP00000407584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCE1 C9JHM6 C9JTY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421915.1	AGBL5-009	559	65aa	ENSP00000395266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCE1 C9JHM6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437006.1	AGBL5-007	489	25aa	ENSP00000395721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHM6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441931.1	AGBL5-010	481	137aa	ENSP00000400905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1L5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487078.1	AGBL5-001	3261	816aa	ENSP00000433830.1	Nonsense mediated decay		C9JCE1 C9JHM6 C9JQG9 C9JTY1 Q8NDL9	-	-
ENST00000477136.1	AGBL5-002	2165	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489683.1	AGBL5-003	1850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 3,261 bps, Translation length: 816 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NDL9

Version

ENST00000487078.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250186 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000487078.1 AGBL5-001

Summary