Transcript: ENST00000520040.1 MRPL22-004

Description

mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:14480]

Gene Synonyms

HSPC158, L22mt, MRP-L22, MRP-L25, MRPL25, RPML25

Location

Chromosome 5: 154,334,759-154,346,505 forward strand.

About this transcript

This transcript has 3 exons, is associated with 4499 variant alleles and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSG00000082515.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000523037.1	MRPL22-001	3176	206aa	ENSP00000431040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4331	Q9NWU5	NM_014180.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522038.1	MRPL22-003	3162	212aa	ENSP00000429039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESL0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265229.8	MRPL22-002	3035	126aa	ENSP00000265229.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43391	Q9NWU5	NM_001014990.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439747.3	MRPL22-005	784	232aa	ENSP00000411177.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519059.1	MRPL22-006	511	38aa	ENSP00000430648.1	Nonsense mediated decay		H0YBZ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518364.1	MRPL22-007	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520040.1	MRPL22-004	2344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,344 bps,

Version

ENST00000520040.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377475 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000520040.1 MRPL22-004

Summary