Transcript: ENST00000488196.1 STRADB-004

Description

STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:13205]

Gene Synonyms

ALS2CR2, CALS-21, ILPIP, ILPIPA, PAPK

Location

Chromosome 2: 202,316,457-202,323,546 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2702 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSG00000082146.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000194530.3	STRADB-001	2293	418aa	ENSP00000194530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2348	Q9C0K7	NM_018571.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392249.2	STRADB-003	2190	377aa	ENSP00000376080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56161	Q9C0K7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458269.2	STRADB-006	772	194aa	ENSP00000409552.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415688.1	STRADB-009	616	89aa	ENSP00000413574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000447698.1	STRADB-005	576	37aa	ENSP00000404359.1	Nonsense mediated decay		F8WCQ7	-	-
ENST00000488196.1	STRADB-004	424	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468123.1	STRADB-008	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466770.1	STRADB-010	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484098.1	STRADB-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498648.1	STRADB-007	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 424 bps,

Version

ENST00000488196.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336953 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000488196.1 STRADB-004

Summary