Transcript: ENST00000525052.1 RBL1-004

Description

retinoblastoma-like 1 (p107) [Source:HGNC Symbol;Acc:9893]

Gene Synonyms

CP107, PRB1, cp107, p107

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 5552 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373664.3	RBL1-001	5684	1068aa	ENSP00000362768.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13289	P28749	NM_002895.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344359.3	RBL1-002	3225	1014aa	ENSP00000343646.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13290	P28749	NM_183404.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525052.1	RBL1-004	763	254aa	ENSP00000434711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000527999.1	RBL1-003	599	113aa	ENSP00000437240.1	Nonsense mediated decay		E9PNB6	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 763 bps, Translation length: 254 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000525052.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000383546 (version 1)