Transcript: ENST00000560130.1 HSP90AA1-009

Description

heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253]

Gene Synonyms

EL52, FLJ31884, HSP86, HSP89A, HSP90A, HSP90N, HSPC1, HSPCA, HSPCAL1, HSPCAL4, HSPN, Hsp89, Hsp90, LAP2

Location

Chromosome 14: 102,550,233-102,551,135 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 860 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSG00000080824.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334701.7	HSP90AA1-001	3510	854aa	ENSP00000335153.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32160	K9JA46 P07900 Q86SX1 Q8TBA7 Q96HX7	NM_001017963.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000216281.8	HSP90AA1-002	3379	732aa	ENSP00000216281.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9967	K9JA46 P07900 Q8TBA7 Q96HX7	NM_005348.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441629.2	HSP90AA1-201	1710	413aa	ENSP00000396189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86U12	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553585.1	HSP90AA1-005	581	174aa	ENSP00000450712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2J8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554401.1	HSP90AA1-003	1710	52aa	ENSP00000451400.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557234.1	HSP90AA1-008	584	80aa	ENSP00000452241.1	Nonsense mediated decay		G3V592	-	-
ENST00000558600.1	HSP90AA1-010	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557089.1	HSP90AA1-007	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556554.1	HSP90AA1-004	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560130.1	HSP90AA1-009	488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555662.1	HSP90AA1-006	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 488 bps,

Version

ENST00000560130.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415295 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000560130.1 HSP90AA1-009

Summary