Transcript: ENST00000376350.3 PTPRH-001

Description

protein tyrosine phosphatase, receptor type, H [Source:HGNC Symbol;Acc:9672]

Gene Synonyms

SAP-1, SAP1

Location

About this transcript

This transcript has 20 exons, is annotated with 56 domains and features, is associated with 15805 variant alleles and maps to 652 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376350.3	PTPRH-001	3877	1115aa	ENSP00000365528.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33110	Q9HD43	NM_002842.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263434.5	PTPRH-002	3343	937aa	ENSP00000263434.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54321	C9JCH2	NM_001161440.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588559.1	PTPRH-003	2636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586852.1	PTPRH-007	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586310.1	PTPRH-008	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588370.1	PTPRH-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587662.1	PTPRH-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,877 bps, Translation length: 1,115 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HD43

CCDS

This transcript is a member of the Human CCDS set: CCDS33110

Version

ENST00000376350.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452649 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.