Transcript: ENST00000355520.5 OPHN1-001

Description

oligophrenin 1 [Source:HGNC Symbol;Acc:8148]

Gene Synonyms

ARHGAP41, MRX60, OPN1

Location

About this transcript

This transcript has 25 exons, is annotated with 19 domains and features, is associated with 118776 variant alleles and maps to 750 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355520.5	OPHN1-001	7879	802aa	ENSP00000347710.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14388	O60890 Q7Z2H1	NM_002547.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540071.1	OPHN1-201	2959	694aa	ENSP00000438617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2E3 Q7Z2H1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484842.1	OPHN1-004	774	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467444.1	OPHN1-002	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491714.1	OPHN1-005	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486068.1	OPHN1-003	120	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 23, Transcript length: 7,879 bps, Translation length: 802 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60890

CCDS

This transcript is a member of the Human CCDS set: CCDS14388

Version

ENST00000355520.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000057011 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.