Transcript: ENST00000262650.6 ITCH-002

Description

itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:13890]

Gene Synonyms

AIF4, AIP4, NAPP1, dJ468O1.1

Location

About this transcript

This transcript has 26 exons, is annotated with 41 domains and features, is associated with 65495 variant alleles and maps to 695 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374864.4	ITCH-001	6401	862aa	ENSP00000363998.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13234	Q96J02	NM_031483.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262650.6	ITCH-002	3089	903aa	ENSP00000262650.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58768	Q96J02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535650.1	ITCH-201	2940	752aa	ENSP00000445608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58769	Q96J02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483727.1	ITCH-005	1070	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486883.1	ITCH-003	703	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461661.1	ITCH-007	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479215.1	ITCH-004	205	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 24, Transcript length: 3,089 bps, Translation length: 903 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96J02

CCDS

This transcript is a member of the Human CCDS set: CCDS58768

Version

ENST00000262650.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078783 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.