Transcript: ENST00000497959.1 MCCC1-006

Description

methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:HGNC Symbol;Acc:6936]

Gene Synonyms

MCC-B, MCCA

Location

Chromosome 3: 182,733,077-182,817,031 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 16 domains and features, is associated with 34474 variant alleles and maps to 594 oligo probes.

Gene

This transcript is a product of gene ENSG00000078070.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000492597.1	MCCC1-002	2774	616aa	ENSP00000419898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHF7 F5GYT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265594.4	MCCC1-001	2545	725aa	ENSP00000265594.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3241	E9PHF7 F2Z3E2 F5GYT8 Q96RQ3	NM_020166.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476176.1	MCCC1-003	1906	598aa	ENSP00000420433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PG35 F5GYT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539926.1	MCCC1-201	1860	426aa	ENSP00000441253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497959.1	MCCC1-006	2874	434aa	ENSP00000420648.1	Nonsense mediated decay		G5E9X5	-	-
ENST00000497830.1	MCCC1-005	2227	47aa	ENSP00000420088.1	Nonsense mediated decay		F2Z3E2	-	-
ENST00000495767.1	MCCC1-004	1860	61aa	ENSP00000419658.1	Nonsense mediated decay		F2Z2Z7	-	-
ENST00000486226.1	MCCC1-010	581	112aa	ENSP00000420223.1	Nonsense mediated decay		F2Z3E2 F8WDI3	-	-
ENST00000466650.1	MCCC1-007	567	47aa	ENSP00000418979.1	Nonsense mediated decay		F2Z3E2	-	-
ENST00000487634.1	MCCC1-009	559	61aa	ENSP00000420591.1	Nonsense mediated decay		F2Z2Z7	-	-
ENST00000490284.1	MCCC1-008	557	56aa	ENSP00000419328.1	Nonsense mediated decay		F8WF46	-	-
ENST00000489909.1	MCCC1-011	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464601.1	MCCC1-012	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473955.1	MCCC1-013	222	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 12, Transcript length: 2,874 bps, Translation length: 434 residues

Version

ENST00000497959.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000350780 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000497959.1 MCCC1-006

Summary