Transcript: ENST00000467116.1 NFKB2-002

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:HGNC Symbol;Acc:7795]

Gene Synonyms

CVID10, H2TF1, LYT-10, LYT10, NF-kB2, p105, p52

Location

Chromosome 10: 104,155,463-104,158,975 forward strand.

About this transcript

This transcript has 12 exons, is associated with 1777 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000077150.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369966.3	NFKB2-003	3101	900aa	ENSP00000358983.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41564	M0QZX1 M0R119 Q00653	NM_001077494.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428099.1	NFKB2-201	3048	899aa	ENSP00000410256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41565	M0QZX1 M0R119 Q00653	NM_001288724.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000189444.6	NFKB2-001	3011	899aa	ENSP00000189444.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41565	M0QZX1 M0R119 Q00653	NM_002502.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601386.1	NFKB2-007	585	22aa	ENSP00000470826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZX1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471698.1	NFKB2-004	472	68aa	ENSP00000471586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZX1 M0R119	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000336486.5	NFKB2-008	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593908.1	NFKB2-006	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467116.1	NFKB2-002	1634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473400.1	NFKB2-005	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 1,634 bps,

Version

ENST00000467116.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050079 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000467116.1 NFKB2-002

Summary