Transcript: ENST00000553025.1 ANKRD13A-004

Description

ankyrin repeat domain 13A [Source:HGNC Symbol;Acc:21268]

Gene Synonyms

ANKRD13, NY-REN-25

Location

Chromosome 12: 110,436,991-110,468,505 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 3 domains and features, is associated with 12152 variant alleles and maps to 312 oligo probes.

Gene

This transcript is a product of gene ENSG00000076513.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261739.4	ANKRD13A-001	4148	590aa	ENSP00000261739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9140	B3KMT9 B4DDL0 Q3ZTS7 Q8IZ07	NM_033121.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547639.1	ANKRD13A-006	904	301aa	ENSP00000449781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000547419.2	ANKRD13A-008	640	173aa	ENSP00000474745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551491.1	ANKRD13A-010	561	83aa	ENSP00000447110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W150	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553025.1	ANKRD13A-004	1455	173aa	ENSP00000474172.1	Nonsense mediated decay		S4R3D2	-	-
ENST00000550404.1	ANKRD13A-002	2350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553251.1	ANKRD13A-007	3315	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549826.1	ANKRD13A-009	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546476.1	ANKRD13A-011	896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553246.1	ANKRD13A-005	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 5, Transcript length: 1,455 bps, Translation length: 173 residues

Version

ENST00000553025.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403427 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000553025.1 ANKRD13A-004

Summary