Transcript: ENST00000370221.1 KCNQ2-009

Description

potassium voltage-gated channel, KQT-like subfamily, member 2 [Source:HGNC Symbol;Acc:6296]

Gene Synonyms

BFNC, BFNS1, EBN, EBN1, EIEE7, ENB1, HNSPC, KCNA11, KV7.2, KVEBN1, Kv7.2

Location

Chromosome 20: 62,055,377-62,103,991 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 28974 variant alleles and maps to 318 oligo probes.

Gene

This transcript is a product of gene ENSG00000075043.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354587.3	KCNQ2-201	3275	880aa	ENSP00000346601.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6ND05	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359689.1	KCNQ2-202	3251	872aa	ENSP00000352718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NM44	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359125.2	KCNQ2-003	3249	872aa	ENSP00000352035.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13520	O43526	NM_172107.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357249.2	KCNQ2-001	3195	854aa	ENSP00000349789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13519	O43526	NM_172108.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370224.1	KCNQ2-007	3015	880aa	ENSP00000359244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4VXP3 Q4VXP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360480.3	KCNQ2-011	2908	844aa	ENSP00000353668.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13518	O43526	NM_004518.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344462.4	KCNQ2-012	2750	841aa	ENSP00000339611.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46629	Q4VXP7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344425.5	KCNQ2-006	1423	393aa	ENSP00000345523.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13521	O43526 Q53Y30	NM_172109.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482957.1	KCNQ2-010	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000370221.1	KCNQ2-009	1545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,545 bps,

Version

ENST00000370221.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080359 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000370221.1 KCNQ2-009

Summary